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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932142.1_cds_XP_016478735.1_70350
CDS Infomation

[gene=LOC107800103] [db_xref=GeneID:107800103] [protein=alanine aminotransferase 2, mitochondrial-like] [protein_id=XP_016478735.1] [location=complement(join(14126..14242,14450..14653,15022..15096,15179..15333,15468..15588,15777..15851,16071..16208,16461..16571,16673..16777,16868..16946,17962..18023,18101..18166,18403..18453,18637..18687,19510..19677))] [gbkey=CDS]
Sequence

ATGCGGAGATTCGTATCCTACAGATCTAGAAATCTCATCTCCACTACAACTACTTCTTCA
TTACTTGCTGCGTTTCGTTTCTTGTCCACTCTTCAGCCTTCATCTTCTGATTCAATGGGT
TCCGATTATTCGTCCACACCTGTCACTCGAGACACCCTTAATCCCAAGGTTTTGAACTGT
GAGTATGCTGTCCGTGGAGAGATTGTCACACTTGCTCAGAAATTGCAGGAAGAAATCAAG
GAGAATCCAGGTTCTCATCCCTTCGATGAGATCTTATACTGCAATATTGGAAATCCTCAA
TCACTGGCTCAGCAGCCTATCACTTTCTTTAGAGAGGTCCTTGCATTGTGCGACCATCCA
GCCATTTTGGACAAAAGTGAAACACAAGGTCTGTTCAGTGCGGATGCCATAGAACGAGCT
TTCCAGATCCTTGACCAAATTCCTGGGAGAGCAACTGGTGCATACAGCCACAGTCAGGGC
ATCAAAGGATTGCGCGATACAATTGCTTCTGGTATTGAAGCTCGTGATGGCTATCCTGTG
GATCCAAATGATCTTTTCTTGACTGATGGTGCAAGTCCAGCGGTTCACATGATGATGCAG
CTGCTCATCAGGTCAGAGAATGATGGAATTCTCTGTCCCATTCCCCAGTATCCTCTTTAC
TCTGCTTCAATTGCCCTCCATGGTGGAACTCTTGTTCCTTATTATCTTGATGAACAAACA
GGATGGGGGCTTGAGATCTCAGAACTTGAGCAACAGCTGAAAACCGCAAAATCCAAGGGT
ATTGATGTTAGGGCTTTGGTTGTCATCAATCCAGGCAACCCTACTGGGCAGGTTCTTGGT
GAGGCCAACCAACGGGAAATTGTAGAATTCTGCAAGAGGGAAGGCCTTGTCCTTCTGGCT
GATGAAGTCTATCAAGAAAATGTTTACGTGCCTGACAAGAAATTCCACTCATTTAAGAAA
GTTTCCCGCTCAATGGGATATGGTGAAAAGGATATATCTTTAGTGTCTTTTCAGTCCGTG
TCAAAAGGATTCTATGGAGAGTGTGGAAAGCGAGGAGGTTACATGGAGGTCACTGGTTTT
AGCCCTGAAGTGCGGGAACAGATATACAAAGTGGCGTCTGTCAATCTGTGTTCCAATATC
TCTGGTCAGATACTTGCAAGTCTCATCATGAGTCCCCCAAAGGTGGGAGATGAATCATAC
GTGTCTTTTTCTGCGGAGAAAGAAGGAATACTGTCGTCCTTGGCAAGACGTGCAAAGACA
CTAGAAGATGCATTAAATAGTTTGGAAGGAGTGACATGCAATAGAGCAGAAGGGGCTATG
TATCTCTTTCCGCGTATTAACTTGCCCGACAAAGCAATAAAAGCAGCAGAAGCAGCTAAA
ACTGCACCAGACGCCTTTTATGCTAAACGCCTCCTTAATGCCACTGGAATCGTTGTTGTT
CCAGGCTCTGGATTTCGTCAGGTTCCTGGAACCTGGCATTTTAGATGCACAATTTTACCA
CAAGAAGAGAAGATACCAGCTATTGTATCTCGTCTTACAGAATTCCACGAGAAGTTCATG
AATGAATTTCGCGGCTGA

Peptide Sequence

PEP ID

XP_016478735.1
PEP Infomation

PREDICTED: alanine aminotransferase 2, mitochondrial-like [Nicotiana tabacum]
Sequence

MRRFVSYRSRNLISTTTTSSLLAAFRFLSTLQPSSSDSMGSDYSSTPVTRDTLNPKVLNC
EYAVRGEIVTLAQKLQEEIKENPGSHPFDEILYCNIGNPQSLAQQPITFFREVLALCDHP
AILDKSETQGLFSADAIERAFQILDQIPGRATGAYSHSQGIKGLRDTIASGIEARDGYPV
DPNDLFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEQT
GWGLEISELEQQLKTAKSKGIDVRALVVINPGNPTGQVLGEANQREIVEFCKREGLVLLA
DEVYQENVYVPDKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGFYGECGKRGGYMEVTGF
SPEVREQIYKVASVNLCSNISGQILASLIMSPPKVGDESYVSFSAEKEGILSSLARRAKT
LEDALNSLEGVTCNRAEGAMYLFPRINLPDKAIKAAEAAKTAPDAFYAKRLLNATGIVVV
PGSGFRQVPGTWHFRCTILPQEEKIPAIVSRLTEFHEKFMNEFRG

Transcript Sequence

Gene sequence data has not been registered.